Data of GTP Binding Proteins
The GTP binding proteins dataset from this web-server retrieved from UniProt database. There are totally 22 GTP binding proteins used in this study. The collected protein sequences in were divided into two datasets: the training dataset and the independent test dataset. In this phase, the training dataset is used for identifying GTP binding sites in transport proteins; the independent test dataset is used to evaluate the performance of the proposed method. We use 4 GTP binding proteins as independent testing, then the training dataset includes 18 GTP proteins (contains 364 GTP binding and 10434 Non-GTP binding). The details of all datasets are listed in this table.
No. | Protein | Name | Length | GTP | Non GTP |
---|---|---|---|---|---|
1 | Q9UTE0 | Protein sey1 | 762 | 12 | 357 |
2 | Q8IXI2 | Mitochondrial Rho GTPase 1 | 618 | 26 | 639 |
3 | P60953 | Cell division control protein 42 homolog | 191 | 17 | 421 |
4 | P20606 | Small COPII coat GTPase SAR1 | 190 | 16 | 547 |
5 | Q9ERI2 | Ras-related protein Rab-27A | 221 | 23 | 416 |
6 | Q9ULW5 | Ras-related protein Rab-26 | 256 | 12 | 530 |
7 | O35963 | Ras-related protein Rab-33B | 229 | 16 | 392 |
8 | Q5S006 | Leucine-rich repeat serine/threonine-protein kinase 2 | 2527 | 23 | 409 |
9 | P93042 | Protein ROOT HAIR DEFECTIVE 3 | 802 | 17 | 1316 |
10 | Q9C0L9 | Protein SEY1 | 790 | 22 | 390 |
11 | Q9H0F7 | ADP-ribosylation factor-like protein 6 | 186 | 22 | 440 |
12 | P33650 | Ferrous iron transport protein B | 773 | 17 | 651 |
13 | P42208 | Septin-2 | 361 | 26 | 410 |
14 | A8INQ0 | ADP-ribosylation factor-like protein 13B | 527 | 7 | 372 |
15 | Q57986 | Ferrous iron transport protein B homolog | 668 | 7 | 136 |
16 | O75695 | Protein XRP2 | 350 | 13 | 402 |
17 | P51157 | Ras-related protein Rab-28 | 221 | 15 | 477 |
18 | P62834 | Ras-related protein Rap-1A | 184 | 9 | 394 |
19 | P09527 | Ras-related protein Rab-7a | 207 | 26 | 395 |
20 | Q6IQ22 | Ras-related protein Rab-12 | 244 | 10 | 278 |
21 | Q9UL25 | Ras-related protein Rab-21 | 225 | 13 | 480 |
22 | Q41009 | Translocase of chloroplast 34 | 310 | 12 | 451 |